BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B06SP1|AL427435
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig509 1572 0.0
>3x_Contig509
Length = 1924
Score = 1572 bits (791), Expect = 0.0
Identities = 821/831 (98%)
Strand = Plus / Minus
Query: 1 gatcttcacatctgtccaaagagtccgccaatgcctttgacgattcaagagaaatagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gatcttcacatctgtccaaagagtccgccaatgcctttgacgattcaagagaaatagaca 788
Query: 61 tgccctttctgacttgaagcatttcgttcaacagttcaaagttagtggatggaggtgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tgccctttctgacttgaagcatttcgttcaacagttcaaagttagtggatggaggtgctg 728
Query: 121 catgccttctcaacatagcagtttgagggaatgcttcgtaaatctttctagcaacagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 catgccttctcaacatagcagtttgagggaatgcttcgtaaatctttctagcaacagaaa 668
Query: 181 tgttagctaacaacatgaattcttcaaccaaagagttggtgtcaagaagtttcttgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgttagctaacaacatgaattcttcaaccaaagagttggtgtcaagaagtttcttgattt 608
Query: 241 caacttcgtttggatcagaggtttcactatccatatgaactttaacttcaggggaagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 caacttcgtttggatcagaggtttcactatccatatgaactttaacttcaggggaagcca 548
Query: 301 aatttagcgcacctgcgtccaacctcttttgtttcagtttcttggaaagttgcaaaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 547 aatttagcgcacctgcgtccaacctcttttgtttcagtttcttggaaagttgcaaaacag 488
Query: 361 ccctcattccaagtgtcaactcatctttagcagtttcatcatcgatacggttttgagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccctcattccaagtgtcaactcatctttagcagtttcatcatcgatacggttttgagctt 428
Query: 421 tttcgtaagaaaatgcttctctggatctaataaccgattttgtgaaatcaacaccaacaa 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttcgtaagacaatgcttctctggatctaataaccgattttgtgaaatcaacaccaacaa 368
Query: 481 tgttagcatcgttatcaagctcccatacaacggaaaatgcaaatctatcaacatagggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgttagcatcgttatcaagctcccatacaacggaaaatgcaaatctatcaacatagggct 308
Query: 541 tcaatgaacagaggtcagtacctaatagcataggtaacatatcgatacgtttatcgacta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcaatgaacagaggtcagtacctaatagcataggtaacatatcgatacgtttatcgacta 248
Query: 601 agtagacagaagtacctcttgaggcaccttctgcgtctaatgcggtacccggtttaacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agtagacagaagtacctcttgaggcaccttctgcgtctaatgcggtacccggtttaacga 188
Query: 661 aatgagttacgtcagcaatatggacaccaacttcccagttaccatttggaagttgctttg 720
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 187 aatgagtaacgtcagcaatatggacaccaacttcccagttaccatttggcagttgctttg 128
Query: 721 cgtgcaaggcatcgtcaatatcgacacatcctggaggatcaatactacaaatcaatttat 780
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 127 cgtgcaaggcatcgtcaatatcgacacatcctggaggctcaatactacaaatcaatttat 68
Query: 781 ctctgaagtcctttctgcttggtaataacgggtcatttctgattgcttctg 831
||||||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 67 ctctgaactcctttctgcttggtaataacgccccatttctgcttgcttctg 17
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7115
Number of Sequences: 1807
Number of extensions: 7115
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)